Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Gm15376-201ENSMUST00000122258 783 ntBASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Gm17837-201ENSMUST00000186435 985 ntBASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.78□□□□□ -0.52
Shisa8J3QNX5 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa8J3QNX5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Shisa8J3QNX5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Shisa8J3QNX5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shisa8J3QNX5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shisa8J3QNX5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shisa8J3QNX5 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Shisa8J3QNX5 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.77□□□□□ -0.52
Shisa8J3QNX5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shisa8J3QNX5 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shisa8J3QNX5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shisa8J3QNX5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Gm14767-201ENSMUST00000121559 586 ntBASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Gm7775-201ENSMUST00000218871 853 ntBASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shisa8J3QNX5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Shisa8J3QNX5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms