Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim55G3X8Y1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Gm15957-201ENSMUST00000118893 974 ntBASIC13.26□□□□□ -0.29
Trim55G3X8Y1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Gm24513-201ENSMUST00000174964 138 ntBASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim55G3X8Y1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Gm27397-201ENSMUST00000184997 107 ntBASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim55G3X8Y1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Gm37368-201ENSMUST00000193173 3212 ntBASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Gm23935-201ENSMUST00000102303 57 ntBASIC13.24□□□□□ -0.29
Trim55G3X8Y1 Gm24270-201ENSMUST00000102326 57 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms