Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm28043E0CXC2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Gm37917-201ENSMUST00000194711 392 ntBASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm28043E0CXC2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.97□□□□□ -0.33
Gm28043E0CXC2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Gm12341-201ENSMUST00000119724 503 ntBASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Gm18624-201ENSMUST00000220966 658 ntBASIC12.97□□□□□ -0.33
Gm28043E0CXC2 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Gm15823-201ENSMUST00000064305 670 ntBASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm28043E0CXC2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms