Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Gm27731-201ENSMUST00000185192 107 ntBASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Gm10478-201ENSMUST00000084451 396 ntBASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pnldc1B2RXZ1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Gm13392-201ENSMUST00000117708 150 ntBASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Gm13612-201ENSMUST00000119276 390 ntBASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Gm8062-201ENSMUST00000139696 444 ntBASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Gm29127-201ENSMUST00000188304 517 ntBASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Gm37424-201ENSMUST00000191727 561 ntBASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pnldc1B2RXZ1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Gm5939-201ENSMUST00000119613 2874 ntBASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Gm43677-201ENSMUST00000198098 2378 ntBASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Gm44069-201ENSMUST00000204898 506 ntBASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Gm9299-201ENSMUST00000206392 1140 ntBASIC13□□□□□ -0.33
Pnldc1B2RXZ1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pnldc1B2RXZ1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pnldc1B2RXZ1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pnldc1B2RXZ1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pnldc1B2RXZ1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.99□□□□□ -0.33
Pnldc1B2RXZ1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pnldc1B2RXZ1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pnldc1B2RXZ1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms