Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 AC126257.1-201ENSMUST00000213195 1536 ntBASIC16.28■□□□□ 0.2
Scn7aB1AYL1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn7aB1AYL1 Gm12165-201ENSMUST00000117047 342 ntBASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Gm19459-201ENSMUST00000176240 835 ntBASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Gm8343-201ENSMUST00000182705 994 ntBASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn7aB1AYL1 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Gm37131-201ENSMUST00000192502 1561 ntBASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Gm14247-201ENSMUST00000120950 237 ntBASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Gm28071-201ENSMUST00000190355 478 ntBASIC16.27■□□□□ 0.19
Scn7aB1AYL1 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Gm45219-201ENSMUST00000205602 465 ntBASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Gm45118-201ENSMUST00000208928 825 ntBASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Ginm1-202ENSMUST00000065124 300 ntBASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn7aB1AYL1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Gm12579-201ENSMUST00000118040 783 ntBASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Gm43184-201ENSMUST00000197247 542 ntBASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Gm4607-201ENSMUST00000206649 577 ntBASIC16.26■□□□□ 0.19
Scn7aB1AYL1 AC159819.2-201ENSMUST00000216151 342 ntBASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Gm4797-201ENSMUST00000219075 1283 ntBASIC16.26■□□□□ 0.19
Scn7aB1AYL1 AC154849.4-201ENSMUST00000224868 365 ntBASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn7aB1AYL1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Gm26286-201ENSMUST00000104166 134 ntBASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Gm3332-201ENSMUST00000189337 928 ntBASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms