Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Gm15429-201ENSMUST00000151268 798 ntBASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ccdc112A0AUP1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ccdc112A0AUP1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc112A0AUP1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms