Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.96■□□□□ 0.63
Sec61a2Q9JLR1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sec61a2Q9JLR1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Sec61a2Q9JLR1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sec61a2Q9JLR1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sec61a2Q9JLR1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a2Q9JLR1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Sec61a2Q9JLR1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a2Q9JLR1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a2Q9JLR1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.93■□□□□ 0.62
Sec61a2Q9JLR1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.93■□□□□ 0.62
Sec61a2Q9JLR1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a2Q9JLR1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a2Q9JLR1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.93■□□□□ 0.62
Sec61a2Q9JLR1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Sec61a2Q9JLR1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sec61a2Q9JLR1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sec61a2Q9JLR1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sec61a2Q9JLR1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sec61a2Q9JLR1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sec61a2Q9JLR1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sec61a2Q9JLR1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sec61a2Q9JLR1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sec61a2Q9JLR1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a2Q9JLR1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sec61a2Q9JLR1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sec61a2Q9JLR1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sec61a2Q9JLR1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sec61a2Q9JLR1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.9■□□□□ 0.62
Sec61a2Q9JLR1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.9■□□□□ 0.62
Sec61a2Q9JLR1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sec61a2Q9JLR1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sec61a2Q9JLR1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sec61a2Q9JLR1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sec61a2Q9JLR1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sec61a2Q9JLR1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sec61a2Q9JLR1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Sec61a2Q9JLR1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.89■□□□□ 0.61
Sec61a2Q9JLR1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.89■□□□□ 0.61
Sec61a2Q9JLR1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sec61a2Q9JLR1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a2Q9JLR1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sec61a2Q9JLR1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sec61a2Q9JLR1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec61a2Q9JLR1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec61a2Q9JLR1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sec61a2Q9JLR1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec61a2Q9JLR1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec61a2Q9JLR1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec61a2Q9JLR1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sec61a2Q9JLR1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sec61a2Q9JLR1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sec61a2Q9JLR1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec61a2Q9JLR1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec61a2Q9JLR1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec61a2Q9JLR1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec61a2Q9JLR1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms