Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Samm50Q8BGH2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Samm50Q8BGH2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Samm50Q8BGH2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Samm50Q8BGH2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Samm50Q8BGH2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.7■■□□□ 1.54
Samm50Q8BGH2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Samm50Q8BGH2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Samm50Q8BGH2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Samm50Q8BGH2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Samm50Q8BGH2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Samm50Q8BGH2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Samm50Q8BGH2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Samm50Q8BGH2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Samm50Q8BGH2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Samm50Q8BGH2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Samm50Q8BGH2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Samm50Q8BGH2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Samm50Q8BGH2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Samm50Q8BGH2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Samm50Q8BGH2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Samm50Q8BGH2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Samm50Q8BGH2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Samm50Q8BGH2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Samm50Q8BGH2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Samm50Q8BGH2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
Samm50Q8BGH2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Samm50Q8BGH2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Samm50Q8BGH2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.54
Samm50Q8BGH2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Samm50Q8BGH2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Samm50Q8BGH2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.64■■□□□ 1.54
Samm50Q8BGH2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.64■■□□□ 1.54
Samm50Q8BGH2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Samm50Q8BGH2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Samm50Q8BGH2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Samm50Q8BGH2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Samm50Q8BGH2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.63■■□□□ 1.53
Samm50Q8BGH2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Samm50Q8BGH2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Samm50Q8BGH2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Samm50Q8BGH2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Samm50Q8BGH2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Samm50Q8BGH2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.63■■□□□ 1.53
Samm50Q8BGH2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Samm50Q8BGH2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Samm50Q8BGH2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Samm50Q8BGH2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Samm50Q8BGH2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Samm50Q8BGH2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Samm50Q8BGH2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Samm50Q8BGH2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Samm50Q8BGH2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Samm50Q8BGH2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Samm50Q8BGH2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.61■■□□□ 1.53
Samm50Q8BGH2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Samm50Q8BGH2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Samm50Q8BGH2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Samm50Q8BGH2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.6■■□□□ 1.53
Samm50Q8BGH2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Samm50Q8BGH2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Samm50Q8BGH2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Samm50Q8BGH2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Samm50Q8BGH2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Samm50Q8BGH2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Samm50Q8BGH2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.59■■□□□ 1.53
Samm50Q8BGH2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Samm50Q8BGH2 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.59■■□□□ 1.53
Samm50Q8BGH2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Samm50Q8BGH2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.59■■□□□ 1.53
Samm50Q8BGH2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Samm50Q8BGH2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.59■■□□□ 1.53
Samm50Q8BGH2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
Samm50Q8BGH2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Samm50Q8BGH2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Samm50Q8BGH2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Samm50Q8BGH2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Samm50Q8BGH2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Samm50Q8BGH2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
Samm50Q8BGH2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Samm50Q8BGH2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Samm50Q8BGH2 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.57■■□□□ 1.52
Samm50Q8BGH2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Samm50Q8BGH2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.57■■□□□ 1.52
Samm50Q8BGH2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.57■■□□□ 1.52
Samm50Q8BGH2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Samm50Q8BGH2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Samm50Q8BGH2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Samm50Q8BGH2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Samm50Q8BGH2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Samm50Q8BGH2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.56■■□□□ 1.52
Samm50Q8BGH2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
Samm50Q8BGH2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Samm50Q8BGH2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Samm50Q8BGH2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.55■■□□□ 1.52
Samm50Q8BGH2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Samm50Q8BGH2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Samm50Q8BGH2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Samm50Q8BGH2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC24.55■■□□□ 1.52
Samm50Q8BGH2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms