Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cspg5Q71M36 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cspg5Q71M36 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cspg5Q71M36 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cspg5Q71M36 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Cspg5Q71M36 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cspg5Q71M36 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cspg5Q71M36 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.8■■□□□ 1.08
Cspg5Q71M36 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cspg5Q71M36 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cspg5Q71M36 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cspg5Q71M36 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Cspg5Q71M36 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cspg5Q71M36 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Cspg5Q71M36 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cspg5Q71M36 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cspg5Q71M36 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cspg5Q71M36 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cspg5Q71M36 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.78■■□□□ 1.08
Cspg5Q71M36 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cspg5Q71M36 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cspg5Q71M36 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Cspg5Q71M36 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cspg5Q71M36 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cspg5Q71M36 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cspg5Q71M36 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.77■■□□□ 1.08
Cspg5Q71M36 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cspg5Q71M36 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.76■■□□□ 1.07
Cspg5Q71M36 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cspg5Q71M36 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.76■■□□□ 1.07
Cspg5Q71M36 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.76■■□□□ 1.07
Cspg5Q71M36 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cspg5Q71M36 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.76■■□□□ 1.07
Cspg5Q71M36 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cspg5Q71M36 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cspg5Q71M36 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cspg5Q71M36 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cspg5Q71M36 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cspg5Q71M36 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.75■■□□□ 1.07
Cspg5Q71M36 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cspg5Q71M36 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cspg5Q71M36 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cspg5Q71M36 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.74■■□□□ 1.07
Cspg5Q71M36 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cspg5Q71M36 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cspg5Q71M36 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.73■■□□□ 1.07
Cspg5Q71M36 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cspg5Q71M36 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.73■■□□□ 1.07
Cspg5Q71M36 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.73■■□□□ 1.07
Cspg5Q71M36 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cspg5Q71M36 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cspg5Q71M36 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cspg5Q71M36 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.73■■□□□ 1.07
Cspg5Q71M36 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cspg5Q71M36 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cspg5Q71M36 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cspg5Q71M36 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Cspg5Q71M36 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.72■■□□□ 1.07
Cspg5Q71M36 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cspg5Q71M36 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
Cspg5Q71M36 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cspg5Q71M36 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.71■■□□□ 1.07
Cspg5Q71M36 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cspg5Q71M36 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cspg5Q71M36 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cspg5Q71M36 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cspg5Q71M36 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cspg5Q71M36 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cspg5Q71M36 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Cspg5Q71M36 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cspg5Q71M36 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Cspg5Q71M36 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cspg5Q71M36 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Cspg5Q71M36 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cspg5Q71M36 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cspg5Q71M36 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cspg5Q71M36 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.69■■□□□ 1.06
Cspg5Q71M36 Gm45417-201ENSMUST00000209533 758 ntBASIC21.69■■□□□ 1.06
Cspg5Q71M36 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cspg5Q71M36 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.69■■□□□ 1.06
Cspg5Q71M36 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cspg5Q71M36 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.69■■□□□ 1.06
Cspg5Q71M36 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cspg5Q71M36 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cspg5Q71M36 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cspg5Q71M36 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cspg5Q71M36 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cspg5Q71M36 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.68■■□□□ 1.06
Cspg5Q71M36 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.68■■□□□ 1.06
Cspg5Q71M36 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cspg5Q71M36 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Cspg5Q71M36 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.68■■□□□ 1.06
Cspg5Q71M36 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
Cspg5Q71M36 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cspg5Q71M36 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cspg5Q71M36 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cspg5Q71M36 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Cspg5Q71M36 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.67■■□□□ 1.06
Cspg5Q71M36 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cspg5Q71M36 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms