Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Ptch1Q61115 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC31.51■■■□□ 2.64
Ptch1Q61115 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Ptch1Q61115 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC31.51■■■□□ 2.64
Ptch1Q61115 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
Ptch1Q61115 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Ptch1Q61115 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
Ptch1Q61115 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ptch1Q61115 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Ptch1Q61115 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ptch1Q61115 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
Ptch1Q61115 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ptch1Q61115 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ptch1Q61115 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Ptch1Q61115 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ptch1Q61115 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ptch1Q61115 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Ptch1Q61115 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ptch1Q61115 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ptch1Q61115 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ptch1Q61115 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Ptch1Q61115 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC31.47■■■□□ 2.63
Ptch1Q61115 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC31.47■■■□□ 2.63
Ptch1Q61115 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
Ptch1Q61115 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
Ptch1Q61115 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ptch1Q61115 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Ptch1Q61115 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC31.46■■■□□ 2.63
Ptch1Q61115 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC31.46■■■□□ 2.63
Ptch1Q61115 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ptch1Q61115 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ptch1Q61115 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Ptch1Q61115 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ptch1Q61115 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ptch1Q61115 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ptch1Q61115 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
Ptch1Q61115 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ptch1Q61115 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ptch1Q61115 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Ptch1Q61115 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
Ptch1Q61115 Gm7291-201ENSMUST00000199147 382 ntBASIC31.44■■■□□ 2.62
Ptch1Q61115 Gm9870-201ENSMUST00000063874 645 ntBASIC31.44■■■□□ 2.62
Ptch1Q61115 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ptch1Q61115 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ptch1Q61115 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC31.43■■■□□ 2.62
Ptch1Q61115 Gm43173-201ENSMUST00000202246 593 ntBASIC31.43■■■□□ 2.62
Ptch1Q61115 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC31.43■■■□□ 2.62
Ptch1Q61115 Spcs1-207ENSMUST00000228767 1008 ntBASIC31.43■■■□□ 2.62
Ptch1Q61115 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
Ptch1Q61115 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC31.43■■■□□ 2.62
Ptch1Q61115 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Ptch1Q61115 Gm26571-201ENSMUST00000181399 666 ntBASIC31.42■■■□□ 2.62
Ptch1Q61115 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC31.42■■■□□ 2.62
Ptch1Q61115 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC31.42■■■□□ 2.62
Ptch1Q61115 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Ptch1Q61115 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
Ptch1Q61115 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
Ptch1Q61115 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Ptch1Q61115 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC31.41■■■□□ 2.62
Ptch1Q61115 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ptch1Q61115 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ptch1Q61115 Gm8493-201ENSMUST00000196881 489 ntBASIC31.41■■■□□ 2.62
Ptch1Q61115 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
Ptch1Q61115 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ptch1Q61115 Gm12251-201ENSMUST00000117893 792 ntBASIC31.4■■■□□ 2.62
Ptch1Q61115 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Ptch1Q61115 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.61
Ptch1Q61115 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Ptch1Q61115 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ptch1Q61115 Krt8-ps-201ENSMUST00000208495 945 ntBASIC31.38■■■□□ 2.61
Ptch1Q61115 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
Ptch1Q61115 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ptch1Q61115 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ptch1Q61115 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC31.36■■■□□ 2.61
Ptch1Q61115 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC31.36■■■□□ 2.61
Ptch1Q61115 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Ptch1Q61115 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ptch1Q61115 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ptch1Q61115 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ptch1Q61115 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Ptch1Q61115 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC31.34■■■□□ 2.61
Ptch1Q61115 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Ptch1Q61115 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ptch1Q61115 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ptch1Q61115 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ptch1Q61115 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Ptch1Q61115 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC31.33■■■□□ 2.61
Ptch1Q61115 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ptch1Q61115 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ptch1Q61115 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ptch1Q61115 Wdr70-203ENSMUST00000227371 1130 ntBASIC31.32■■■□□ 2.61
Ptch1Q61115 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ptch1Q61115 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ptch1Q61115 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Ptch1Q61115 Gm42699-201ENSMUST00000198104 1657 ntBASIC31.32■■■□□ 2.6
Ptch1Q61115 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Ptch1Q61115 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Ptch1Q61115 Gm27011-201ENSMUST00000182352 972 ntBASIC31.31■■■□□ 2.6
Ptch1Q61115 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC31.31■■■□□ 2.6
Ptch1Q61115 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms