Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.22■□□□□ 0.83
Spg11Q3UHA3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Spg11Q3UHA3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Spg11Q3UHA3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Spg11Q3UHA3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Spg11Q3UHA3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spg11Q3UHA3 Gm10033-202ENSMUST00000211874 928 ntBASIC20.21■□□□□ 0.83
Spg11Q3UHA3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spg11Q3UHA3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Spg11Q3UHA3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.2■□□□□ 0.82
Spg11Q3UHA3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spg11Q3UHA3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.19■□□□□ 0.82
Spg11Q3UHA3 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.19■□□□□ 0.82
Spg11Q3UHA3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.19■□□□□ 0.82
Spg11Q3UHA3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.19■□□□□ 0.82
Spg11Q3UHA3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Spg11Q3UHA3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Spg11Q3UHA3 Mir7071-201ENSMUST00000184847 69 ntBASIC20.18■□□□□ 0.82
Spg11Q3UHA3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Spg11Q3UHA3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Spg11Q3UHA3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Spg11Q3UHA3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spg11Q3UHA3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.17■□□□□ 0.82
Spg11Q3UHA3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.17■□□□□ 0.82
Spg11Q3UHA3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spg11Q3UHA3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.16■□□□□ 0.82
Spg11Q3UHA3 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.16■□□□□ 0.82
Spg11Q3UHA3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spg11Q3UHA3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Spg11Q3UHA3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spg11Q3UHA3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spg11Q3UHA3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spg11Q3UHA3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Spg11Q3UHA3 AV356131-201ENSMUST00000206201 750 ntBASIC20.15■□□□□ 0.82
Spg11Q3UHA3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Spg11Q3UHA3 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.14■□□□□ 0.81
Spg11Q3UHA3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.14■□□□□ 0.81
Spg11Q3UHA3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Spg11Q3UHA3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Spg11Q3UHA3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.13■□□□□ 0.81
Spg11Q3UHA3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Spg11Q3UHA3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Spg11Q3UHA3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Spg11Q3UHA3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Spg11Q3UHA3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.13■□□□□ 0.81
Spg11Q3UHA3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Spg11Q3UHA3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Spg11Q3UHA3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.12■□□□□ 0.81
Spg11Q3UHA3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spg11Q3UHA3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spg11Q3UHA3 Gm12933-201ENSMUST00000120203 872 ntBASIC20.12■□□□□ 0.81
Spg11Q3UHA3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.12■□□□□ 0.81
Spg11Q3UHA3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spg11Q3UHA3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Spg11Q3UHA3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Spg11Q3UHA3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Spg11Q3UHA3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Spg11Q3UHA3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Spg11Q3UHA3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Spg11Q3UHA3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Spg11Q3UHA3 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.11■□□□□ 0.81
Spg11Q3UHA3 Gm10252-201ENSMUST00000209541 832 ntBASIC20.11■□□□□ 0.81
Spg11Q3UHA3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Spg11Q3UHA3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Spg11Q3UHA3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Spg11Q3UHA3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.1■□□□□ 0.81
Spg11Q3UHA3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Spg11Q3UHA3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Spg11Q3UHA3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.1■□□□□ 0.81
Spg11Q3UHA3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Spg11Q3UHA3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Spg11Q3UHA3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.09■□□□□ 0.81
Spg11Q3UHA3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Spg11Q3UHA3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Spg11Q3UHA3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.08■□□□□ 0.81
Spg11Q3UHA3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Spg11Q3UHA3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Spg11Q3UHA3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Spg11Q3UHA3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Spg11Q3UHA3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Spg11Q3UHA3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Spg11Q3UHA3 Gm43060-201ENSMUST00000200621 289 ntBASIC20.07■□□□□ 0.8
Spg11Q3UHA3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Spg11Q3UHA3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Gm27801-201ENSMUST00000184174 223 ntBASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.06■□□□□ 0.8
Spg11Q3UHA3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Spg11Q3UHA3 Gm7977-201ENSMUST00000193787 748 ntBASIC20.05■□□□□ 0.8
Spg11Q3UHA3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.05■□□□□ 0.8
Spg11Q3UHA3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Spg11Q3UHA3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.05■□□□□ 0.8
Spg11Q3UHA3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms