Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nup43P59235 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup43P59235 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.03■□□□□ 0.8
Nup43P59235 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nup43P59235 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nup43P59235 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nup43P59235 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nup43P59235 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup43P59235 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup43P59235 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Nup43P59235 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Nup43P59235 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Nup43P59235 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup43P59235 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nup43P59235 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nup43P59235 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup43P59235 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup43P59235 Gm5812-201ENSMUST00000061073 957 ntBASIC20.01■□□□□ 0.79
Nup43P59235 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup43P59235 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup43P59235 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup43P59235 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup43P59235 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20■□□□□ 0.79
Nup43P59235 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20■□□□□ 0.79
Nup43P59235 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup43P59235 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup43P59235 Gm8093-201ENSMUST00000128935 1892 ntBASIC20■□□□□ 0.79
Nup43P59235 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup43P59235 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20■□□□□ 0.79
Nup43P59235 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup43P59235 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup43P59235 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup43P59235 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.99■□□□□ 0.79
Nup43P59235 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup43P59235 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.99■□□□□ 0.79
Nup43P59235 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.99■□□□□ 0.79
Nup43P59235 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup43P59235 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Nup43P59235 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup43P59235 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.98■□□□□ 0.79
Nup43P59235 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Nup43P59235 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Nup43P59235 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup43P59235 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup43P59235 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Nup43P59235 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Nup43P59235 Gm10232-201ENSMUST00000089221 720 ntBASIC19.98■□□□□ 0.79
Nup43P59235 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Nup43P59235 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup43P59235 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup43P59235 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.97■□□□□ 0.79
Nup43P59235 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup43P59235 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup43P59235 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.97■□□□□ 0.79
Nup43P59235 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup43P59235 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nup43P59235 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup43P59235 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup43P59235 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.96■□□□□ 0.79
Nup43P59235 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Nup43P59235 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup43P59235 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
Nup43P59235 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.95■□□□□ 0.78
Nup43P59235 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup43P59235 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup43P59235 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup43P59235 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Nup43P59235 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup43P59235 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup43P59235 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.94■□□□□ 0.78
Nup43P59235 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup43P59235 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Nup43P59235 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Nup43P59235 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup43P59235 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.94■□□□□ 0.78
Nup43P59235 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup43P59235 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Nup43P59235 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup43P59235 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup43P59235 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.94■□□□□ 0.78
Nup43P59235 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup43P59235 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup43P59235 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup43P59235 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Nup43P59235 Gm15546-201ENSMUST00000122095 826 ntBASIC19.93■□□□□ 0.78
Nup43P59235 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.93■□□□□ 0.78
Nup43P59235 Gm15820-201ENSMUST00000201566 728 ntBASIC19.93■□□□□ 0.78
Nup43P59235 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup43P59235 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup43P59235 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup43P59235 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup43P59235 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup43P59235 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup43P59235 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Nup43P59235 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup43P59235 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup43P59235 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.92■□□□□ 0.78
Nup43P59235 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup43P59235 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup43P59235 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms