Protein–RNA interactions for Protein: P47741

Tnfrsf4, Tumor necrosis factor receptor superfamily member 4, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf4P47741 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf4P47741 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.57■■□□□ 1.04
Tnfrsf4P47741 Gm9870-201ENSMUST00000063874 645 ntBASIC21.57■■□□□ 1.04
Tnfrsf4P47741 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.57■■□□□ 1.04
Tnfrsf4P47741 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf4P47741 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf4P47741 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf4P47741 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Tnfrsf4P47741 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Tnfrsf4P47741 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf4P47741 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Tnfrsf4P47741 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf4P47741 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf4P47741 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf4P47741 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.55■■□□□ 1.04
Tnfrsf4P47741 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.55■■□□□ 1.04
Tnfrsf4P47741 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.55■■□□□ 1.04
Tnfrsf4P47741 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.55■■□□□ 1.04
Tnfrsf4P47741 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Tnfrsf4P47741 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.54■■□□□ 1.04
Tnfrsf4P47741 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Tnfrsf4P47741 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf4P47741 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf4P47741 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.54■■□□□ 1.04
Tnfrsf4P47741 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Tnfrsf4P47741 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Tnfrsf4P47741 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf4P47741 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf4P47741 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf4P47741 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.53■■□□□ 1.04
Tnfrsf4P47741 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Tnfrsf4P47741 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf4P47741 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.53■■□□□ 1.04
Tnfrsf4P47741 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf4P47741 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf4P47741 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf4P47741 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf4P47741 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf4P47741 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf4P47741 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf4P47741 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf4P47741 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf4P47741 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Tnfrsf4P47741 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf4P47741 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf4P47741 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Tnfrsf4P47741 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf4P47741 Gm8495-201ENSMUST00000188740 694 ntBASIC21.51■■□□□ 1.03
Tnfrsf4P47741 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf4P47741 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf4P47741 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf4P47741 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf4P47741 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf4P47741 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf4P47741 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf4P47741 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf4P47741 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf4P47741 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.49■■□□□ 1.03
Tnfrsf4P47741 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.49■■□□□ 1.03
Tnfrsf4P47741 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf4P47741 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf4P47741 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf4P47741 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf4P47741 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf4P47741 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
Tnfrsf4P47741 Gm6139-201ENSMUST00000079261 882 ntBASIC21.48■■□□□ 1.03
Tnfrsf4P47741 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.48■■□□□ 1.03
Tnfrsf4P47741 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Gm18284-201ENSMUST00000172604 624 ntBASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.47■■□□□ 1.03
Tnfrsf4P47741 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.46■■□□□ 1.03
Tnfrsf4P47741 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Tnfrsf4P47741 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.46■■□□□ 1.03
Tnfrsf4P47741 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf4P47741 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
Tnfrsf4P47741 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf4P47741 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Tnfrsf4P47741 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf4P47741 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Tnfrsf4P47741 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf4P47741 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Tnfrsf4P47741 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf4P47741 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf4P47741 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.43■■□□□ 1.02
Tnfrsf4P47741 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Tnfrsf4P47741 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf4P47741 Gm43137-201ENSMUST00000198052 594 ntBASIC21.43■■□□□ 1.02
Tnfrsf4P47741 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.43■■□□□ 1.02
Tnfrsf4P47741 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms