Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Npc1O35604 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Npc1O35604 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Npc1O35604 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1O35604 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1O35604 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1O35604 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Npc1O35604 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Npc1O35604 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.63■□□□□ 0.89
Npc1O35604 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.63■□□□□ 0.89
Npc1O35604 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1O35604 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.62■□□□□ 0.89
Npc1O35604 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1O35604 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1O35604 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Npc1O35604 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Npc1O35604 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1O35604 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Npc1O35604 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Npc1O35604 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1O35604 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1O35604 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.61■□□□□ 0.89
Npc1O35604 Rps24-207ENSMUST00000224568 714 ntBASIC20.61■□□□□ 0.89
Npc1O35604 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.61■□□□□ 0.89
Npc1O35604 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Npc1O35604 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Npc1O35604 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1O35604 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Npc1O35604 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.61■□□□□ 0.89
Npc1O35604 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1O35604 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1O35604 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.6■□□□□ 0.89
Npc1O35604 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1O35604 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.6■□□□□ 0.89
Npc1O35604 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1O35604 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Npc1O35604 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.59■□□□□ 0.89
Npc1O35604 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Npc1O35604 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Npc1O35604 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.59■□□□□ 0.89
Npc1O35604 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Npc1O35604 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Npc1O35604 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Npc1O35604 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Npc1O35604 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Npc1O35604 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Npc1O35604 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1O35604 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.57■□□□□ 0.88
Npc1O35604 Gm45102-201ENSMUST00000207427 857 ntBASIC20.57■□□□□ 0.88
Npc1O35604 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.57■□□□□ 0.88
Npc1O35604 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1O35604 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Npc1O35604 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1O35604 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1O35604 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1O35604 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.56■□□□□ 0.88
Npc1O35604 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1O35604 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Npc1O35604 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1O35604 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1O35604 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.55■□□□□ 0.88
Npc1O35604 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Npc1O35604 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.55■□□□□ 0.88
Npc1O35604 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1O35604 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1O35604 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1O35604 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1O35604 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.54■□□□□ 0.88
Npc1O35604 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1O35604 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.54■□□□□ 0.88
Npc1O35604 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1O35604 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1O35604 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Npc1O35604 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1O35604 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Npc1O35604 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.53■□□□□ 0.88
Npc1O35604 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1O35604 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Npc1O35604 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1O35604 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.52■□□□□ 0.88
Npc1O35604 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1O35604 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1O35604 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.52■□□□□ 0.88
Npc1O35604 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1O35604 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Npc1O35604 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Npc1O35604 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Npc1O35604 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1O35604 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1O35604 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1O35604 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1O35604 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1O35604 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Npc1O35604 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Npc1O35604 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1O35604 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Npc1O35604 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1O35604 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Npc1O35604 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.5■□□□□ 0.87
Npc1O35604 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms