Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.13■■□□□ 1.13
Ccdc188F6WEU2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ccdc188F6WEU2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc188F6WEU2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc188F6WEU2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc188F6WEU2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc188F6WEU2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.11■■□□□ 1.13
Ccdc188F6WEU2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc188F6WEU2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.1■■□□□ 1.13
Ccdc188F6WEU2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc188F6WEU2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc188F6WEU2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.1■■□□□ 1.13
Ccdc188F6WEU2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc188F6WEU2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ccdc188F6WEU2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc188F6WEU2 Gm12251-201ENSMUST00000117893 792 ntBASIC22.09■■□□□ 1.13
Ccdc188F6WEU2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.09■■□□□ 1.13
Ccdc188F6WEU2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.09■■□□□ 1.13
Ccdc188F6WEU2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.09■■□□□ 1.13
Ccdc188F6WEU2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ccdc188F6WEU2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ccdc188F6WEU2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ccdc188F6WEU2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ccdc188F6WEU2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Ccdc188F6WEU2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ccdc188F6WEU2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.06■■□□□ 1.12
Ccdc188F6WEU2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc188F6WEU2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc188F6WEU2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc188F6WEU2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.06■■□□□ 1.12
Ccdc188F6WEU2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.06■■□□□ 1.12
Ccdc188F6WEU2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ccdc188F6WEU2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.06■■□□□ 1.12
Ccdc188F6WEU2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ccdc188F6WEU2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.05■■□□□ 1.12
Ccdc188F6WEU2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ccdc188F6WEU2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.03■■□□□ 1.12
Ccdc188F6WEU2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.03■■□□□ 1.12
Ccdc188F6WEU2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.03■■□□□ 1.12
Ccdc188F6WEU2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ccdc188F6WEU2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc188F6WEU2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccdc188F6WEU2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
Ccdc188F6WEU2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.02■■□□□ 1.12
Ccdc188F6WEU2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
Ccdc188F6WEU2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc188F6WEU2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.01■■□□□ 1.11
Ccdc188F6WEU2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc188F6WEU2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.01■■□□□ 1.11
Ccdc188F6WEU2 Gm9870-201ENSMUST00000063874 645 ntBASIC22.01■■□□□ 1.11
Ccdc188F6WEU2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc188F6WEU2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ccdc188F6WEU2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22■■□□□ 1.11
Ccdc188F6WEU2 Gm43060-201ENSMUST00000200621 289 ntBASIC22■■□□□ 1.11
Ccdc188F6WEU2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22■■□□□ 1.11
Ccdc188F6WEU2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc188F6WEU2 Gm26833-201ENSMUST00000180899 440 ntBASIC21.99■■□□□ 1.11
Ccdc188F6WEU2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Ccdc188F6WEU2 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.98■■□□□ 1.11
Ccdc188F6WEU2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc188F6WEU2 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.98■■□□□ 1.11
Ccdc188F6WEU2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc188F6WEU2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc188F6WEU2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc188F6WEU2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.97■■□□□ 1.11
Ccdc188F6WEU2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc188F6WEU2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc188F6WEU2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc188F6WEU2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc188F6WEU2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.96■■□□□ 1.11
Ccdc188F6WEU2 Gm10602-201ENSMUST00000098239 609 ntBASIC21.96■■□□□ 1.11
Ccdc188F6WEU2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc188F6WEU2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.95■■□□□ 1.1
Ccdc188F6WEU2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc188F6WEU2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.95■■□□□ 1.1
Ccdc188F6WEU2 Nespas-201ENSMUST00000143738 1083 ntBASIC21.95■■□□□ 1.1
Ccdc188F6WEU2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc188F6WEU2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc188F6WEU2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.94■■□□□ 1.1
Ccdc188F6WEU2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms