Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm4950D3YUM8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.07■□□□□ 0.48
Gm4950D3YUM8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm4950D3YUM8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm4950D3YUM8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm4950D3YUM8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.05■□□□□ 0.48
Gm4950D3YUM8 Gm12366-201ENSMUST00000121722 873 ntBASIC18.05■□□□□ 0.48
Gm4950D3YUM8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm4950D3YUM8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm4950D3YUM8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.05■□□□□ 0.48
Gm4950D3YUM8 Gm5786-201ENSMUST00000085368 882 ntBASIC18.05■□□□□ 0.48
Gm4950D3YUM8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm4950D3YUM8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm4950D3YUM8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.05■□□□□ 0.48
Gm4950D3YUM8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm4950D3YUM8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Gm4950D3YUM8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm4950D3YUM8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm4950D3YUM8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm4950D3YUM8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Gm4950D3YUM8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.03■□□□□ 0.48
Gm4950D3YUM8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm4950D3YUM8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm4950D3YUM8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm4950D3YUM8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm4950D3YUM8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm4950D3YUM8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm4950D3YUM8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm4950D3YUM8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm4950D3YUM8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm4950D3YUM8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm4950D3YUM8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Gm4950D3YUM8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.02■□□□□ 0.47
Gm4950D3YUM8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm4950D3YUM8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm4950D3YUM8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm4950D3YUM8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.01■□□□□ 0.47
Gm4950D3YUM8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm4950D3YUM8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm4950D3YUM8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm4950D3YUM8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm4950D3YUM8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm4950D3YUM8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm4950D3YUM8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm4950D3YUM8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Gm4950D3YUM8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm4950D3YUM8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm4950D3YUM8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18■□□□□ 0.47
Gm4950D3YUM8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm4950D3YUM8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm4950D3YUM8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18■□□□□ 0.47
Gm4950D3YUM8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm4950D3YUM8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18■□□□□ 0.47
Gm4950D3YUM8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm4950D3YUM8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4950D3YUM8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4950D3YUM8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.99■□□□□ 0.47
Gm4950D3YUM8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm4950D3YUM8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.99■□□□□ 0.47
Gm4950D3YUM8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.99■□□□□ 0.47
Gm4950D3YUM8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4950D3YUM8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4950D3YUM8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4950D3YUM8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.98■□□□□ 0.47
Gm4950D3YUM8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4950D3YUM8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.98■□□□□ 0.47
Gm4950D3YUM8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4950D3YUM8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.98■□□□□ 0.47
Gm4950D3YUM8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4950D3YUM8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4950D3YUM8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.97■□□□□ 0.47
Gm4950D3YUM8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Gm4950D3YUM8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Gm4950D3YUM8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4950D3YUM8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4950D3YUM8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4950D3YUM8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4950D3YUM8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4950D3YUM8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms