Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4d-3A0A075B625 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4d-3A0A075B625 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4d-3A0A075B625 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4d-3A0A075B625 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav4d-3A0A075B625 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4d-3A0A075B625 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4d-3A0A075B625 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Gm8109-201ENSMUST00000194076 746 ntBASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4d-3A0A075B625 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav4d-3A0A075B625 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4d-3A0A075B625 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4d-3A0A075B625 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Trav4d-3A0A075B625 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4d-3A0A075B625 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4d-3A0A075B625 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav4d-3A0A075B625 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav4d-3A0A075B625 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Gm24970-201ENSMUST00000175582 82 ntBASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4d-3A0A075B625 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4d-3A0A075B625 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4d-3A0A075B625 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4d-3A0A075B625 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4d-3A0A075B625 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav4d-3A0A075B625 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav4d-3A0A075B625 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4d-3A0A075B625 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav4d-3A0A075B625 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4d-3A0A075B625 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4d-3A0A075B625 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav4d-3A0A075B625 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4d-3A0A075B625 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4d-3A0A075B625 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4d-3A0A075B625 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4d-3A0A075B625 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4d-3A0A075B625 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4d-3A0A075B625 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav4d-3A0A075B625 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4d-3A0A075B625 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4d-3A0A075B625 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav4d-3A0A075B625 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trav4d-3A0A075B625 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4d-3A0A075B625 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4d-3A0A075B625 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4d-3A0A075B625 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav4d-3A0A075B625 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4d-3A0A075B625 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4d-3A0A075B625 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4d-3A0A075B625 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4d-3A0A075B625 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4d-3A0A075B625 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4d-3A0A075B625 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4d-3A0A075B625 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4d-3A0A075B625 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms