Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
H2afb3S4R1G7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Gm22189-201ENSMUST00000103822 86 ntBASIC11.68□□□□□ -0.54
H2afb3S4R1G7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2afb3S4R1G7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Gm7730-201ENSMUST00000212486 454 ntBASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb3S4R1G7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
H2afb3S4R1G7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms