Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Gm26956-201ENSMUST00000182176 986 ntBASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Gm37259-201ENSMUST00000193903 849 ntBASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Daam2-202ENSMUST00000224595 1926 ntBASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcb1Q9Z0H3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Gm25668-201ENSMUST00000157700 129 ntBASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcb1Q9Z0H3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Gm26083-201ENSMUST00000157904 193 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms