Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atp6ap1Q9R1Q9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm16479-201ENSMUST00000121706 932 ntBASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atp6ap1Q9R1Q9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm17150-201ENSMUST00000165577 381 ntBASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm4271-201ENSMUST00000174444 973 ntBASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atp6ap1Q9R1Q9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Atp6ap1Q9R1Q9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.65□□□□□ -0.38
Atp6ap1Q9R1Q9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms