Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Gm8062-201ENSMUST00000139696 444 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Mir1938-201ENSMUST00000158746 100 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Gm44069-201ENSMUST00000204898 506 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Clcf1Q9QZM3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Gm37497-201ENSMUST00000195830 798 ntBASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clcf1Q9QZM3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms