Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SrfQ9JM73 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.25□□□□□ -0.45
SrfQ9JM73 Gm8872-201ENSMUST00000197475 1341 ntBASIC12.25□□□□□ -0.45
SrfQ9JM73 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.25□□□□□ -0.45
SrfQ9JM73 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.25□□□□□ -0.45
SrfQ9JM73 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SrfQ9JM73 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SrfQ9JM73 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SrfQ9JM73 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SrfQ9JM73 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.24□□□□□ -0.45
SrfQ9JM73 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
SrfQ9JM73 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.24□□□□□ -0.45
SrfQ9JM73 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.24□□□□□ -0.45
SrfQ9JM73 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SrfQ9JM73 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Gm37073-201ENSMUST00000192469 1222 ntBASIC12.24□□□□□ -0.45
SrfQ9JM73 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Gm37017-201ENSMUST00000195266 747 ntBASIC12.24□□□□□ -0.45
SrfQ9JM73 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Gm8959-201ENSMUST00000213150 571 ntBASIC12.24□□□□□ -0.45
SrfQ9JM73 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.24□□□□□ -0.45
SrfQ9JM73 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.24□□□□□ -0.45
SrfQ9JM73 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.24□□□□□ -0.45
SrfQ9JM73 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SrfQ9JM73 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SrfQ9JM73 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SrfQ9JM73 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SrfQ9JM73 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.23□□□□□ -0.45
SrfQ9JM73 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.23□□□□□ -0.45
SrfQ9JM73 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SrfQ9JM73 Gm11331-201ENSMUST00000119764 288 ntBASIC12.23□□□□□ -0.45
SrfQ9JM73 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.23□□□□□ -0.45
SrfQ9JM73 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.23□□□□□ -0.45
SrfQ9JM73 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.23□□□□□ -0.45
SrfQ9JM73 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.23□□□□□ -0.45
SrfQ9JM73 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.23□□□□□ -0.45
SrfQ9JM73 CT025525.2-201ENSMUST00000227743 423 ntBASIC12.23□□□□□ -0.45
SrfQ9JM73 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SrfQ9JM73 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.23□□□□□ -0.45
SrfQ9JM73 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SrfQ9JM73 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SrfQ9JM73 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SrfQ9JM73 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
SrfQ9JM73 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms