Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Gm5904-201ENSMUST00000210286 865 ntBASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.07□□□□□ -0.32
Lsm7Q9CQQ8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Gm10434-201ENSMUST00000101158 471 ntBASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Gm14723-201ENSMUST00000118686 215 ntBASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Gm24548-201ENSMUST00000158650 108 ntBASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Gm8738-201ENSMUST00000172606 329 ntBASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Gm32025-201ENSMUST00000217960 307 ntBASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Lsm7Q9CQQ8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Gm13786-201ENSMUST00000122371 333 ntBASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm7Q9CQQ8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms