Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trim11Q99PQ2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.75□□□□□ -0.05
Trim11Q99PQ2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim11Q99PQ2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gm13612-201ENSMUST00000119276 390 ntBASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gm28693-202ENSMUST00000190758 331 ntBASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim11Q99PQ2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Gm11618-201ENSMUST00000117946 267 ntBASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.73□□□□□ -0.05
Trim11Q99PQ2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Gm6180-201ENSMUST00000065243 498 ntBASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms