Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.22□□□□□ -0.45
Nkd1Q99MH6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkd1Q99MH6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Syt7-204ENSMUST00000223586 1344 ntBASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Gm5354-201ENSMUST00000182417 973 ntBASIC12.21□□□□□ -0.45
Nkd1Q99MH6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Gm38223-201ENSMUST00000194484 695 ntBASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.21□□□□□ -0.45
Nkd1Q99MH6 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkd1Q99MH6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkd1Q99MH6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkd1Q99MH6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkd1Q99MH6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nkd1Q99MH6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkd1Q99MH6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkd1Q99MH6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.2□□□□□ -0.46
Nkd1Q99MH6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Gm15321-201ENSMUST00000121290 288 ntBASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Gm7730-201ENSMUST00000212486 454 ntBASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkd1Q99MH6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.2□□□□□ -0.46
Nkd1Q99MH6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Gm15371-201ENSMUST00000117057 784 ntBASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Gm6447-201ENSMUST00000118905 835 ntBASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.19□□□□□ -0.46
Nkd1Q99MH6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms