Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gm14350-201ENSMUST00000116642 640 ntBASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gm16202-201ENSMUST00000117532 544 ntBASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gm6152-201ENSMUST00000151704 340 ntBASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gm18473-201ENSMUST00000220543 868 ntBASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.53□□□□□ -0.4
Cstf3Q99LI7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cstf3Q99LI7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Gm5866-201ENSMUST00000177881 973 ntBASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Gm45668-201ENSMUST00000211271 493 ntBASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Gm16372-201ENSMUST00000073088 450 ntBASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cstf3Q99LI7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Gm44069-201ENSMUST00000204898 506 ntBASIC12.51□□□□□ -0.41
Cstf3Q99LI7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.51□□□□□ -0.41
Cstf3Q99LI7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cstf3Q99LI7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms