Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdhga3Q91XY5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdhga3Q91XY5 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Gm8515-201ENSMUST00000194852 576 ntBASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdhga3Q91XY5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdhga3Q91XY5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms