Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Gm13570-201ENSMUST00000140763 309 ntBASIC14.79□□□□□ -0.04
Trex1Q91XB0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.79□□□□□ -0.04
Trex1Q91XB0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.78□□□□□ -0.04
Trex1Q91XB0 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.78□□□□□ -0.04
Trex1Q91XB0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Gm2260-201ENSMUST00000184965 657 ntBASIC14.78□□□□□ -0.04
Trex1Q91XB0 Gm3096-201ENSMUST00000185770 364 ntBASIC14.78□□□□□ -0.04
Trex1Q91XB0 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.78□□□□□ -0.04
Trex1Q91XB0 Rps4l-202ENSMUST00000204242 789 ntBASIC14.78□□□□□ -0.04
Trex1Q91XB0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trex1Q91XB0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trex1Q91XB0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trex1Q91XB0 Gm14109-201ENSMUST00000118814 309 ntBASIC14.77□□□□□ -0.05
Trex1Q91XB0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Gm37201-201ENSMUST00000191845 523 ntBASIC14.77□□□□□ -0.05
Trex1Q91XB0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trex1Q91XB0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trex1Q91XB0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trex1Q91XB0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms