Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
StrcQ8VIM6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.99□□□□□ -0.01
StrcQ8VIM6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Gm3150-201ENSMUST00000166418 204 ntBASIC14.99□□□□□ -0.01
StrcQ8VIM6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.99□□□□□ -0.01
StrcQ8VIM6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
StrcQ8VIM6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.98□□□□□ -0.01
StrcQ8VIM6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.98□□□□□ -0.01
StrcQ8VIM6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.98□□□□□ -0.01
StrcQ8VIM6 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Gm42657-201ENSMUST00000201746 211 ntBASIC14.98□□□□□ -0.01
StrcQ8VIM6 Gm2875-201ENSMUST00000211333 360 ntBASIC14.98□□□□□ -0.01
StrcQ8VIM6 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.98□□□□□ -0.01
StrcQ8VIM6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.98□□□□□ -0.01
StrcQ8VIM6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Gm22920-201ENSMUST00000102175 109 ntBASIC14.97□□□□□ -0.01
StrcQ8VIM6 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.97□□□□□ -0.01
StrcQ8VIM6 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Gm3551-201ENSMUST00000190750 664 ntBASIC14.97□□□□□ -0.01
StrcQ8VIM6 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
StrcQ8VIM6 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.96□□□□□ -0.01
StrcQ8VIM6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Gm17889-201ENSMUST00000198410 598 ntBASIC14.96□□□□□ -0.01
StrcQ8VIM6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
StrcQ8VIM6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms