Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Gm6152-201ENSMUST00000151704 340 ntBASIC10.86□□□□□ -0.67
H1fooQ8VIK3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.86□□□□□ -0.67
H1fooQ8VIK3 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Gm16372-201ENSMUST00000073088 450 ntBASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Rubie-203ENSMUST00000227803 2430 ntBASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Gm12928-201ENSMUST00000117115 573 ntBASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.85□□□□□ -0.67
H1fooQ8VIK3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
H1fooQ8VIK3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H1fooQ8VIK3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms