Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Gm12742-201ENSMUST00000117326 410 ntBASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Gm12957-201ENSMUST00000117835 377 ntBASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Gm11637-201ENSMUST00000120601 592 ntBASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Gm26927-201ENSMUST00000182385 965 ntBASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rprd1aQ8VDS4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Mir686-201ENSMUST00000102174 109 ntBASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Gm18041-201ENSMUST00000218210 618 ntBASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rprd1aQ8VDS4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rprd1aQ8VDS4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rprd1aQ8VDS4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Rprd1aQ8VDS4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rprd1aQ8VDS4 Gm5370-201ENSMUST00000187187 574 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms