Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Daam2-202ENSMUST00000224595 1926 ntBASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nup35Q8R4R6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gm4875-201ENSMUST00000118257 786 ntBASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Gm6447-201ENSMUST00000118905 835 ntBASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.54□□□□□ -0.72
Nup35Q8R4R6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms