Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Nudcd3Q8R1N4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nudcd3Q8R1N4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Gm29608-201ENSMUST00000190444 463 ntBASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Gm43094-201ENSMUST00000196549 921 ntBASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nudcd3Q8R1N4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Nudcd3Q8R1N4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms