Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm24196-201ENSMUST00000179161 110 ntBASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gm27847-201ENSMUST00000183711 107 ntBASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gm5745-201ENSMUST00000183748 313 ntBASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gm27375-201ENSMUST00000183799 107 ntBASIC12.22□□□□□ -0.45
Clrn1Q8K445 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.22□□□□□ -0.45
Clrn1Q8K445 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.22□□□□□ -0.45
Clrn1Q8K445 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.22□□□□□ -0.45
Clrn1Q8K445 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.22□□□□□ -0.45
Clrn1Q8K445 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.21□□□□□ -0.45
Clrn1Q8K445 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Gm13123-201ENSMUST00000122173 492 ntBASIC12.21□□□□□ -0.45
Clrn1Q8K445 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Gm22331-201ENSMUST00000158066 136 ntBASIC12.21□□□□□ -0.45
Clrn1Q8K445 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Gm28693-202ENSMUST00000190758 331 ntBASIC12.21□□□□□ -0.45
Clrn1Q8K445 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.21□□□□□ -0.45
Clrn1Q8K445 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.21□□□□□ -0.46
Clrn1Q8K445 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clrn1Q8K445 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.2□□□□□ -0.46
Clrn1Q8K445 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms