Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Mir686-201ENSMUST00000102174 109 ntBASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Gm16202-201ENSMUST00000117532 544 ntBASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Gm8463-201ENSMUST00000208573 613 ntBASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc38Q8CDN8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 AC154404.1-201ENSMUST00000223601 2077 ntBASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc38Q8CDN8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Gm12928-201ENSMUST00000117115 573 ntBASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Gm5866-201ENSMUST00000177881 973 ntBASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc38Q8CDN8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms