Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vcpip1Q8CDG3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Gm5687-201ENSMUST00000118252 640 ntBASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vcpip1Q8CDG3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Mir6392-201ENSMUST00000184924 108 ntBASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Gm43630-201ENSMUST00000201550 776 ntBASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.92□□□□□ -0.18
Vcpip1Q8CDG3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Mir6420-201ENSMUST00000185032 102 ntBASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vcpip1Q8CDG3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms