Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.07■□□□□ 0
Alx1Q8C8B0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.07■□□□□ 0
Alx1Q8C8B0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.07■□□□□ 0
Alx1Q8C8B0 Gm6013-201ENSMUST00000212264 699 ntBASIC15.07■□□□□ 0
Alx1Q8C8B0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.07■□□□□ 0
Alx1Q8C8B0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx1Q8C8B0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Alx1Q8C8B0 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.07■□□□□ 0
Alx1Q8C8B0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Alx1Q8C8B0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Alx1Q8C8B0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Alx1Q8C8B0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Alx1Q8C8B0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.06■□□□□ 0
Alx1Q8C8B0 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.06■□□□□ 0
Alx1Q8C8B0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.06■□□□□ 0
Alx1Q8C8B0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.06■□□□□ 0
Alx1Q8C8B0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.06■□□□□ 0
Alx1Q8C8B0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.06■□□□□ 0
Alx1Q8C8B0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.06■□□□□ 0
Alx1Q8C8B0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.06■□□□□ 0
Alx1Q8C8B0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Alx1Q8C8B0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Alx1Q8C8B0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Alx1Q8C8B0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Alx1Q8C8B0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Alx1Q8C8B0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Alx1Q8C8B0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Alx1Q8C8B0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.05■□□□□ 0
Alx1Q8C8B0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Alx1Q8C8B0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Alx1Q8C8B0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Alx1Q8C8B0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.05■□□□□ -0
Alx1Q8C8B0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.05■□□□□ -0
Alx1Q8C8B0 Gm6023-201ENSMUST00000118217 606 ntBASIC15.05■□□□□ -0
Alx1Q8C8B0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.05■□□□□ -0
Alx1Q8C8B0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.05■□□□□ -0
Alx1Q8C8B0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.05■□□□□ -0
Alx1Q8C8B0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.05■□□□□ -0
Alx1Q8C8B0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Gm27501-201ENSMUST00000183599 107 ntBASIC15.05■□□□□ -0
Alx1Q8C8B0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.05■□□□□ -0
Alx1Q8C8B0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.05■□□□□ -0
Alx1Q8C8B0 Gm45930-201ENSMUST00000221330 292 ntBASIC15.05■□□□□ -0
Alx1Q8C8B0 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.05■□□□□ -0
Alx1Q8C8B0 Gm7399-201ENSMUST00000032395 858 ntBASIC15.05■□□□□ -0
Alx1Q8C8B0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.05■□□□□ -0
Alx1Q8C8B0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Alx1Q8C8B0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Alx1Q8C8B0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Alx1Q8C8B0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Alx1Q8C8B0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Alx1Q8C8B0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.04■□□□□ -0
Alx1Q8C8B0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.04■□□□□ -0
Alx1Q8C8B0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Alx1Q8C8B0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Alx1Q8C8B0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.04■□□□□ -0
Alx1Q8C8B0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Alx1Q8C8B0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Alx1Q8C8B0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Alx1Q8C8B0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Alx1Q8C8B0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Alx1Q8C8B0 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.04■□□□□ -0
Alx1Q8C8B0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.04■□□□□ -0
Alx1Q8C8B0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Alx1Q8C8B0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.04■□□□□ -0
Alx1Q8C8B0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.04■□□□□ -0
Alx1Q8C8B0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms