Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.14■□□□□ 0.01
Usp44Q8C2S0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp44Q8C2S0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp44Q8C2S0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp44Q8C2S0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Usp44Q8C2S0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp44Q8C2S0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp44Q8C2S0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp44Q8C2S0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.13■□□□□ 0.01
Usp44Q8C2S0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp44Q8C2S0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Gm25927-201ENSMUST00000175058 117 ntBASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Gm27514-201ENSMUST00000183692 110 ntBASIC15.12■□□□□ 0.01
Usp44Q8C2S0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp44Q8C2S0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.11■□□□□ 0.01
Usp44Q8C2S0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gm25857-201ENSMUST00000082788 129 ntBASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.11■□□□□ 0.01
Usp44Q8C2S0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp44Q8C2S0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms