Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Gm13813-201ENSMUST00000120998 787 ntBASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Gm22331-201ENSMUST00000158066 136 ntBASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.35□□□□□ -0.27
Trub1Q8C0D0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Gm27839-201ENSMUST00000184242 106 ntBASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trub1Q8C0D0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trub1Q8C0D0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.33□□□□□ -0.27
Trub1Q8C0D0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trub1Q8C0D0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trub1Q8C0D0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm14704-201ENSMUST00000120300 874 ntBASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm11637-201ENSMUST00000120601 592 ntBASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm2231-201ENSMUST00000125661 612 ntBASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm27331-201ENSMUST00000183705 60 ntBASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Gm10146-201ENSMUST00000072739 309 ntBASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.33□□□□□ -0.28
Trub1Q8C0D0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms