Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf2Q8BZT2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Gm17376-201ENSMUST00000166016 84 ntBASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf2Q8BZT2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Mir877-201ENSMUST00000104738 85 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm15808-201ENSMUST00000119046 604 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm18056-201ENSMUST00000207670 568 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm18061-201ENSMUST00000208350 562 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm18063-201ENSMUST00000208529 568 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Gm18052-201ENSMUST00000208750 559 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms