Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gm9002-201ENSMUST00000178437 499 ntBASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Gm38223-201ENSMUST00000194484 695 ntBASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Trerf1Q8BXJ2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trerf1Q8BXJ2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trerf1Q8BXJ2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trerf1Q8BXJ2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trerf1Q8BXJ2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.71□□□□□ -0.22
Trerf1Q8BXJ2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trerf1Q8BXJ2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trerf1Q8BXJ2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Gm15429-201ENSMUST00000151268 798 ntBASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trerf1Q8BXJ2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trerf1Q8BXJ2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms