Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4Q8BQZ5 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Mir7221-201ENSMUST00000184009 72 ntBASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpsf4Q8BQZ5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gm43433-201ENSMUST00000196573 481 ntBASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpsf4Q8BQZ5 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.55□□□□□ -0.4
Cpsf4Q8BQZ5 Gm14127-201ENSMUST00000117906 678 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms