Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Mir6392-201ENSMUST00000184924 108 ntBASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Gm6983-201ENSMUST00000214912 628 ntBASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc40Q8BI79 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Gm13689-201ENSMUST00000119360 685 ntBASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Gm44397-201ENSMUST00000195950 113 ntBASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc40Q8BI79 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.54□□□□□ -0.24
Ccdc40Q8BI79 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms