Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Gm23270-201ENSMUST00000104055 131 ntBASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Gm16296-201ENSMUST00000159905 325 ntBASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Gm5904-201ENSMUST00000210286 865 ntBASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Ccdc88cQ6VGS5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Gm38266-201ENSMUST00000194931 421 ntBASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc88cQ6VGS5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Gm3096-201ENSMUST00000185770 364 ntBASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc88cQ6VGS5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc88cQ6VGS5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc88cQ6VGS5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc88cQ6VGS5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc88cQ6VGS5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc88cQ6VGS5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms