Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.64□□□□□ -0.39
Vsx2Q61412 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.64□□□□□ -0.39
Vsx2Q61412 Gm8598-201ENSMUST00000221184 836 ntBASIC12.64□□□□□ -0.39
Vsx2Q61412 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.64□□□□□ -0.39
Vsx2Q61412 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx2Q61412 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx2Q61412 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vsx2Q61412 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Vsx2Q61412 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx2Q61412 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx2Q61412 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx2Q61412 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx2Q61412 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vsx2Q61412 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx2Q61412 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vsx2Q61412 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Vsx2Q61412 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vsx2Q61412 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx2Q61412 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.64□□□□□ -0.39
Vsx2Q61412 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.63□□□□□ -0.39
Vsx2Q61412 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.63□□□□□ -0.39
Vsx2Q61412 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.63□□□□□ -0.39
Vsx2Q61412 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vsx2Q61412 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Vsx2Q61412 Gm11803-201ENSMUST00000119966 444 ntBASIC12.63□□□□□ -0.39
Vsx2Q61412 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.63□□□□□ -0.39
Vsx2Q61412 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.63□□□□□ -0.39
Vsx2Q61412 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.63□□□□□ -0.39
Vsx2Q61412 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.63□□□□□ -0.39
Vsx2Q61412 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Gm6091-201ENSMUST00000098307 165 ntBASIC12.63□□□□□ -0.39
Vsx2Q61412 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.63□□□□□ -0.39
Vsx2Q61412 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.63□□□□□ -0.39
Vsx2Q61412 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx2Q61412 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.62□□□□□ -0.39
Vsx2Q61412 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vsx2Q61412 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.62□□□□□ -0.39
Vsx2Q61412 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.62□□□□□ -0.39
Vsx2Q61412 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vsx2Q61412 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.62□□□□□ -0.39
Vsx2Q61412 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Gm12390-201ENSMUST00000117897 397 ntBASIC12.62□□□□□ -0.39
Vsx2Q61412 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vsx2Q61412 Gm8810-201ENSMUST00000172895 754 ntBASIC12.62□□□□□ -0.39
Vsx2Q61412 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.62□□□□□ -0.39
Vsx2Q61412 Gm7561-201ENSMUST00000211203 886 ntBASIC12.62□□□□□ -0.39
Vsx2Q61412 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vsx2Q61412 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Gm10012-201ENSMUST00000078252 192 ntBASIC12.62□□□□□ -0.39
Vsx2Q61412 Gm25857-201ENSMUST00000082788 129 ntBASIC12.62□□□□□ -0.39
Vsx2Q61412 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.62□□□□□ -0.39
Vsx2Q61412 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.62□□□□□ -0.39
Vsx2Q61412 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Vsx2Q61412 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms