Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.36□□□□□ -0.43
Nr1h4Q60641 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.36□□□□□ -0.43
Nr1h4Q60641 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm11524-201ENSMUST00000119349 807 ntBASIC12.36□□□□□ -0.43
Nr1h4Q60641 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm26464-201ENSMUST00000157094 305 ntBASIC12.36□□□□□ -0.43
Nr1h4Q60641 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.36□□□□□ -0.43
Nr1h4Q60641 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.36□□□□□ -0.43
Nr1h4Q60641 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.36□□□□□ -0.43
Nr1h4Q60641 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nr1h4Q60641 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.35□□□□□ -0.43
Nr1h4Q60641 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.35□□□□□ -0.43
Nr1h4Q60641 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gm13223-201ENSMUST00000118609 747 ntBASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gm5279-201ENSMUST00000199575 745 ntBASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gm19078-201ENSMUST00000206311 727 ntBASIC12.35□□□□□ -0.43
Nr1h4Q60641 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.35□□□□□ -0.43
Nr1h4Q60641 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Nr1h4Q60641 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nr1h4Q60641 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nr1h4Q60641 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nr1h4Q60641 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nr1h4Q60641 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.34□□□□□ -0.43
Nr1h4Q60641 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nr1h4Q60641 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nr1h4Q60641 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms