Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.11■□□□□ 0.01
Prdm1Q60636 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Prdm1Q60636 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.11■□□□□ 0.01
Prdm1Q60636 Gm12957-201ENSMUST00000117835 377 ntBASIC15.11■□□□□ 0.01
Prdm1Q60636 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Prdm1Q60636 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.11■□□□□ 0.01
Prdm1Q60636 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Prdm1Q60636 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Prdm1Q60636 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prdm1Q60636 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Prdm1Q60636 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.11■□□□□ 0.01
Prdm1Q60636 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Prdm1Q60636 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Prdm1Q60636 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.1■□□□□ 0.01
Prdm1Q60636 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Prdm1Q60636 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Prdm1Q60636 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Prdm1Q60636 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.1■□□□□ 0.01
Prdm1Q60636 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.1■□□□□ 0.01
Prdm1Q60636 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Gm22121-201ENSMUST00000175148 54 ntBASIC15.1■□□□□ 0.01
Prdm1Q60636 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Prdm1Q60636 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Prdm1Q60636 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.1■□□□□ 0.01
Prdm1Q60636 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.1■□□□□ 0.01
Prdm1Q60636 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prdm1Q60636 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Gm25927-201ENSMUST00000175058 117 ntBASIC15.09■□□□□ 0.01
Prdm1Q60636 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.09■□□□□ 0.01
Prdm1Q60636 AY702102-202ENSMUST00000194651 1173 ntBASIC15.09■□□□□ 0.01
Prdm1Q60636 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.09■□□□□ 0.01
Prdm1Q60636 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.09■□□□□ 0.01
Prdm1Q60636 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prdm1Q60636 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Prdm1Q60636 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms