Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Gm38158-201ENSMUST00000194617 339 ntBASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Gm8738-201ENSMUST00000172606 329 ntBASIC15.52■□□□□ 0.08
Vps54Q5SPW0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Gm18584-201ENSMUST00000203098 964 ntBASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Mir339-201ENSMUST00000083659 96 ntBASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps54Q5SPW0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps54Q5SPW0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps54Q5SPW0 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.52■□□□□ 0.07
Vps54Q5SPW0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Vps54Q5SPW0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps54Q5SPW0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps54Q5SPW0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps54Q5SPW0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps54Q5SPW0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Vps54Q5SPW0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps54Q5SPW0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Mir1938-201ENSMUST00000158746 100 ntBASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Gm8099-201ENSMUST00000200510 742 ntBASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps54Q5SPW0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Vps54Q5SPW0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms