Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm45224-201ENSMUST00000208203 414 ntBASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc88aQ5SNZ0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm20426-201ENSMUST00000173657 440 ntBASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc88aQ5SNZ0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm13097-201ENSMUST00000210722 397 ntBASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm11667-201ENSMUST00000119828 486 ntBASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc88aQ5SNZ0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm12502-201ENSMUST00000120197 444 ntBASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm6407-201ENSMUST00000176468 549 ntBASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc88aQ5SNZ0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms