Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Gm5525-201ENSMUST00000190438 1312 ntBASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Gm13142-201ENSMUST00000117213 1453 ntBASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arhgef40Q3UPH7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Gm11989-201ENSMUST00000117240 672 ntBASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Gm11362-201ENSMUST00000118838 850 ntBASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Gm9022-201ENSMUST00000182482 992 ntBASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Gm37795-201ENSMUST00000194216 2459 ntBASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 H2-Q3-201ENSMUST00000172583 608 ntBASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 AC159819.2-201ENSMUST00000216151 342 ntBASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arhgef40Q3UPH7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Gm44851-201ENSMUST00000205735 2309 ntBASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Gm13035-201ENSMUST00000117496 342 ntBASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Arhgef40Q3UPH7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Retreg1-206ENSMUST00000228306 1430 ntBASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Mir6546-201ENSMUST00000184460 62 ntBASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Olfr1347-205ENSMUST00000220413 964 ntBASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 AC154849.4-201ENSMUST00000224868 365 ntBASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Arhgef40Q3UPH7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms